If you’ve been having trouble getting your Pumpkin Cookies to be more chewy than cakey, this recipe will solve your problem, still using real pumpkin! Miso adds moisture and extra umami that plays well with pumpkin, while mini peanut butter cups dotted on top give these cookies a bit more sweetness, creaminess and variety in each bite. No chill time needed, you’ll have your dozen cookies in just half an hour.

Not to downplay my soft pumpkin snickerdoodle cookies, if you like a more cakey cookie, but these miso pumpkin cookies have been a hit this year! I packed a half dozen for my dog groomer since she happened to come by while I was testing this recipe.
I got a text from her the next day saying “Your cookies are magical! I’ve never had a cookie that’s like biting into cloud! Flavor was perfect!!!” I’m not making this up, I have proof in my text chain!
I also made a batch for my trick-or-treating station at work and everyone came by with positive reviews! I tested them 4 times so I promise you they will work beautifully.

Trang’s Recipe Highlights
- FLAVOR: Full of delicious warm pumpkin pie spice flavor, and a subtle sweetness from milk chocolate and a hint of peanut butter from the mini peanut butter cups. You won’t be able to taste the miso but it replaces the salt and adds umami and complexity to these pumpkin cookies.
- TEXTURE: Soft and slightly chewy, not at all cakey. Their texture is not as chewy as a typical chocolate chip cookie but not soft and cakey like a muffin top.
- EASE: The dough comes together quickly in just 10-15 minutes and you can bake right away, no chilling required.
Ingredients and useful notes
You’ll need 11 ingredients for this miso pumpkin cookies recipe, pictured below. As always, you can find the full list of ingredients with quantities and step-by-step instructions in the recipe card.

Dry the pumpkin
I wanted to make a more chewy pumpkin cookie for this recipe so I searched high and low to see what others are doing to combat this cakey pumpkin cookie issue. I learned from In Bloom Bakery and Sally’s Baking Addiction that drying your pumpkin will do the trick.
The reason is that pumpkin contains about 90% water, this makes the cookies cakey like muffin tops, which is not a bad thing. But if you’re looking for that chewy texture, you’ll need to limit the amount of liquid added to the cookie dough.
So this recipe calls for patting the pumpkin dry on a plate using paper towels. I just press the paper towel on the pumpkin and squeeze out the water in the sink until no more water can be squeezed out anymore. You’ll want to reduce the pumpkin by about half its original volume or weight.

A note of caution, if you use a cheesecloth to squeeze out the water, this will work too, but you will likely end up removing too much water. I tried this and my pumpkin reduced way too much. I didn’t bake the cookies with this super dry pumpkin but I suspect it may make your cookies too dry. So if you do use a cheesecloth, don’t go all the way, just squeeze out enough water to reduce your pumpkin by half.
About the miso
I typically use Marukome premium white miso paste in a lot of my miso desserts. For this recipe, I used a sweet white miso that has reduced sodium but is a bit saltier than the Marukome brand. It contains 570 mg of sodium per 24 grams serving size, compared to 290 mg of sodium per 18 grams serving size.
So for the amount I used in this recipe (¼ cup or 70 grams), the amount of sodium is 1662 mg. This is between half and ¾ teaspoon of salt. This number will be useful if you are using a different type of miso with different sodium content or rather omit the miso all together.
But note that the miso also contributes to the liquid ingredients which make these cookies more moist, so omitting miso may result in dryer cookies.
Notes on mini peanut butter cup and substitutions
I added just a few mini peanut butter cups on top of the cookie dough balls just before baking for even distribution, and also to preserve their integrity. If you mix the mini PB cups into the batter, the beater can destroy them pretty easily. You can also add more or less to your preference but I feel like between 3-5 mini PB cups is enough per cookie.
You can also substitute chocolate chips and peanut butter chips – this combination was great in these chocolate peanut butter chip cookies. Again for even distribution, add them by hand on top of the cookie dough balls or if you don’t care too much, then just mix them into the dough.

You can also omit the mix-ins for the best chewy pumpkin snickerdoodle cookies. Or make half batch with mix-ins and half without. It’s choose your own pumpkin cookie adventure!
Hungry for more?
Miso Pumpkin Cookies Recipe

Equipment
Ingredients
Spiced sugar topping
- 3 tablespoon (40 g) granulated sugar
- ½ teaspoon pumpkin pie spice
Pumpkin cookies
- ½ cup (120 g) pure pumpkin puree, dry
- 4 oz (113 g) unsalted butter, softened
- 1 cup (200 g) brown sugar, light or dark, lightly packed
- ¼ cup (70 g) miso, see notes
- 2 large egg yolk, room temperature
- 2 teaspoon pure vanilla extract
- 1 ½ cup (200 g) all-purpose flour
- 2 teaspoon pumpkin pie spice
- 1 teaspoon baking soda
- ½ cup (100 g) mini peanut butter cups
Instructions
- Preheat the oven – Set the oven rack in the middle of the oven and preheat to 350°F (180°C).
- Mix the spiced sugar topping – Mix together granulated sugar and pumpkin pie spice in a shallow bowl and set aside.
- Dry the pumpkin – Spread your pure pumpkin puree on a plate and use clean paper towels folded into a couple layers to press out the water. Squeeze the water out into a sink and keep pressing until you cannot squeeze out anymore water from your paper towels. This should reduce the pumpkin down to about half its original volume or weight. It doesn’t have to be exact, the recipe will still work even if you’re a bit over or under.
- Cream the butter – Add softened butter to your stand mixer bowl and beat with the sugar until lighter in color and fluffy, about 2 minutes.
- Add the rest of the wet ingredients – Add dry pumpkin, miso, egg yolks and vanilla to the creamed butter and sugar mixture. Beat for another two minutes until creamy and fluffy.
- Add dry ingredients – Sift flour, pumpkin pie spice and baking soda into a small mixing bowl, whisk together to distribute evenly. Add this mixture to the stand mixer bowl and stir until the cookie dough forms. Don’t overmix.
- Form the cookie dough balls – Divide cookie dough into 24 portions using a 1 ½ tablespoon cookie scoop. Roll the dough between the palms of your hands to form a round ball, immediately roll it in the spiced sugar topping, and set it on a lined baking sheet. The dough is soft but shouldn’t be too sticky. Handle it lightly and very quickly to avoid sticking.
- Add mini PB cups and bake – Press a few mini peanut butter cups on top of the cookie dough balls and bake in the preheated oven for 13 minutes.
- Cool – Remove the pan from the oven and let cool on a wire rack for 10-15 minutes before moving the cookies to the wire rack to cool completely.
Notes
- Miso substitution: the miso I used contains 570 mg of sodium per 24 grams serving size, for a total of 1662 mg of sodium per ¼ cup. Keep this number in mind when using different miso with different amounts of sodium. This is also between half and ¾ teaspoon of salt if you want to substitute salt for miso. Just keep in mind miso is also a wet ingredient so it may make the cookies a bit drier to remove miso.
- Mini PB cup substitution: you can use a mixture of chocolate chips and peanut butter chips. Or omit to make the best chewy pumpkin snickerdoodle cookies.
- Storage: store your miso peanut butter pumpkin cookies in an airtight container at room temperature for up to a week. You can also freeze them for up to 3 months.
Nutrition
Nutrition information is automatically calculated, so should only be used as an approximation.
Like this recipe? Rate & comment below!Update note: the original recipe used Butterfinger Skull for Halloween but those are no longer available so I updated the recipe to use generic mini peanut butter cups to make ingredient sourcing easier.




















Mwuhahahahaha! Super spooky but these are so fun. What a great halloween treat
What fun!!! Who knew there are chocolate skulls!!! I used to do so much for our Halloween parties back when my kidswere little. I kind of miss it!
These Butterfinger skulls are actually really really good, I’d eat them on a daily basis if they were available 😀
I’m sure you could freeze them! Buy extra while they are available. Maybe you could find them on sale day after Halloween!!!
Thanks for the tips! 😉